Publications

Original articles

 

2020 - 2023

 

  • Beidler I, Steinke N, Schulze T, Sidhu C, Bartosik D, Zühlke MK, Torres Martin L, Krull J, Dutschei T, Ferrero-Bordera B, Rielicke J, Kale V, Sura T, Trautwein-Schult A, Kirstein IV, Wiltshire KH, Teeling H, Becher D, Bengtsson MM, Hehemann JH, Bornscheuer UT, Amann RI & Schweder T. Alpha-glucans from bacterial necromass indicate an intra-population loop within the marine carbon cycle.Nature Commun. 2024.
  • Wang F, Bartosik D, Sidhu C, Siebers R, Lu DC, Trautwein-Schult A, Becher D, Huettel B, Rick J, Kirstein IV, Wiltshire KH, Schweder T, Fuchs BM, Bengtsson MM, Teeling H, Amann RI. Particle-attached bacteria act as gatekeepers in the decomposition of complex phytoplankton polysaccharides.  Microbiome. 2024.
  • Zühlke MK, Ficko-Blean E, Bartosik D, Terrapon N, Jeudy A, Jam M, Wang F, Welsch N, Dürwald A, Torres Martin L, Larocque R, Jouanneau D, Eisenack T, Thomas F, Trautwein-Schult A, Teeling H, Becher D, Schweder T,  Czjzek M. Unveiling the role of novel carbohydrate-binding modules in laminarin interaction of multimodular proteins from marine Bacteroidota during phytoplankton blooms.  Environ Microbiol. 2024.
  • Siebers R, Schultz D, Farza MS, Brauer A, Zühlke D, Mücke PA, Wang F, Bernhardt J, Teeling H, Becher D, Riedel K, Kirstein IV, Wiltshire KH, Hoff KJ, Schweder T, Urich T, Bengtsson MM. Marine particle microbiomes during a spring diatom bloom contain active sulfate-reducing bacteria.  FEMS Microbiol Ecology. 2024.
  • Beirow K, Schmidt C, Jürgen B, Schlüter R, Schweder T, Bednarski PJ. Investigation of TGF-α-overexpressing mouse hepatocytes (TAMH) cultured as spheroids for use in hepatotoxicity screening of drug candidates. J Appl Toxicol. 2023. [Epub ahead of print].
  • Thanh Tam LT, Jähne J, Luong PT, Phuong Thao LT, Nhat LM, Blumenscheit C, Schneider A, Blom J, Kim Chung LT, Anh Minh PL, Thanh HM, Hoat TX, Hoat PC, Son TC, Weinmann M, Herfort S, Vater J, Van Liem N, Schweder T, Lasch P, Borriss R. Two plant-associated Bacillus velezensis strains selected after genome analysis, metabolite profiling, and with proved biocontrol potential, were enhancing harvest yield of coffee and black pepper in large field trials. Front Plant Sci. 2023. 14:1194887.
  • Moeller FU, Herbold CW, Schintlmeister A, Mooshammer M, Motti C, Glasl B, Kitzinger K, Behnam F, Watzka M, Schweder T, Albertsen M, Richter A, Webster NS, Wagner M. Taurine as a key intermediate for host-symbiont interaction in the tropical sponge Ianthella basta. ISME J. 2023. 17(8):1208-1223.
  • Dutschei T, Beidler I, Bartosik D, Seeßelberg JM, Teune M, Bäumgen M, Ferreira SQ, Heldmann J, Nagel F, Krull J, Berndt L, Methling K, Hein M, Becher D, Langer P, Delcea M, Lalk M, Lammers M, Höhne M, Hehemann JH, Schweder T, Bornscheuer UT. Marine Bacteroidetes enzymatically digest xylans from terrestrial plants. Environ Microbiol. 2023. 25(9):1713-1727.
  • Sidhu C, Kirstein IV, Meunier CL, Rick J, Fofonova V, Wiltshire KH, Steinke N, Vidal-Melgosa S, Hehemann JH, Huettel B, Schweder T, Fuchs BM, Amann RI, Teeling H. Dissolved storage glycans shaped the community composition of abundant bacterioplankton clades during a North Sea spring phytoplankton bloom. Microbiome. 2023. 11(1):77.
  • Jähne J, Le Thi TT, Blumenscheit C, Schneider A, Pham TL, Le Thi PT, Blom J, Vater J, Schweder T, Lasch P, Borriss R. Novel Plant-Associated Brevibacillus and Lysinibacillus Genomospecies Harbor a Rich Biosynthetic Potential of Antimicrobial Compounds. Microorganisms. 2023. 11(1):168.
  • Beidler I, Robb CS, Vidal-Melgosa S, Zühlke MK, Bartosik D, Solanki V, Markert S, Becher D, Schweder T, Hehemann JH. Marine bacteroidetes use a conserved enzymatic cascade to digest diatom β-mannan. ISME J. 2023. 17(2):276-285.
  • Dutschei T, Zühlke MK, Welsch N, Eisenack T, Hilkmann M, Krull J, Stühle C, Brott S, Dürwald A, Reisky L, Hehemann JH, Becher D, Schweder T, Bornscheuer UT. Metabolic engineering enables Bacillus licheniformis to grow on the marine polysaccharide ulvan. Microb Cell Fact. 2022. 21(1):207.
  • Krüger A, Welsch N, Dürwald A, Brundiek H, Wardenga R, Piascheck H, Mengers HG, Krabbe J, Beyer S, Kabisch JF, Popper L, Hübel T, Antranikian G, Schweder T. A host-vector toolbox for improved secretory protein overproduction in Bacillus subtilis. Appl Microbiol Biotechnol. 2022. 106(13-16):5137-5151.
  • Brott S, Thomas F, Behrens M, Methling K, Bartosik D, Dutschei T, Lalk M, Michel G, Schweder T, Bornscheuer UT. Connecting Algal Polysaccharide Degradation to Formaldehyde Detoxification. Chembiochem. 2022. 23(14):e202200269.
  • Kizina J, Jordan SFA, Martens GA, Lonsing A, Probian C, Kolovou A, Santarella-Mellwig R, Rhiel E, Littmann S, Markert S, Stüber K, Richter M, Schweder T, Harder J. Methanosaeta and "Candidatus Velamenicoccus archaeovorus". Appl Environ Microbiol. 2022. 88(7):e0240721.
  • Blumenscheit C, Jähne J, Schneider A, Blom J, Schweder T, Lasch P, Borriss R. Genome sequence data of Bacillus velezensis BP1.2A and BT2.4. Data Brief. 2022. 41:107978.
  • Pudlo NA, Pereira GV, Parnami J, Cid M, Markert S, Tingley JP, Unfried F, Ali A, Varghese NJ, Kim KS, Campbell A, Urs K, Xiao Y, Adams R, Martin D, Bolam DN, Becher D, Eloe-Fadrosh EA, Schmidt TM, Abbott DW, Schweder T, Hehemann JH, Martens EC. Diverse events have transferred genes for edible seaweed digestion from marine to human gut bacteria. Cell Host Microbe. 2022. 30(3):314-328.e11.
  • Bäumgen M, Dutschei T, Bartosik D, Suster C, Reisky L, Gerlach N, Stanetty C, Mihovilovic MD, Schweder T, Hehemann JH, Bornscheuer UT. A new carbohydrate-active oligosaccharide dehydratase is involved in the degradation of ulvan. J Biol Chem. 2021. 297(4):101210.
  • Dürwald A, Zühlke MK, Schlüter R, Gebbe R, Bartosik D, Unfried F, Becher D, Schweder T. Reaching out in anticipation: bacterial membrane extensions represent a permanent investment in polysaccharide sensing and utilization. Environ Microbiol. 2021. 23(6):3149-3163.
  • Oberbeckmann S, Bartosik D, Huang S, Werner J, Hirschfeld C, Wibberg D, Heiden SE, Bunk B, Overmann J, Becher D, Kalinowski J, Schweder T, Labrenz M, Markert S. Genomic and proteomic profiles of biofilms on microplastics are decoupled from artificial surface properties. Environ Microbiol. 2021. 23(6):3099-3115.
  • Francis TB, Bartosik D, Sura T, Sichert A, Hehemann JH, Markert S, Schweder T, Fuchs BM, Teeling H, Amann RI, Becher D. Changing expression patterns of TonB-dependent transporters suggest shifts in polysaccharide consumption over the course of a spring phytoplankton bloom. ISME J. 2021. 15(8):2336-2350.
  • Vidal-Melgosa S, Sichert A, Francis TB, Bartosik D, Niggemann J, Wichels A, Willats WGT, Fuchs BM, Teeling H, Becher D, Schweder T, Amann R, Hehemann JH. Diatom fucan polysaccharide precipitates carbon during algal blooms. Nat Commun. 2021. 12(1):1150.
  • Hinzke T, Kleiner M, Meister M, Schlüter R, Hentschker C, Pané-Farré J, Hildebrandt P, Felbeck H, Sievert SM, Bonn F, Völker U, Becher D, Schweder T, Markert S. Bacterial symbiont subpopulations have different roles in a deep-sea symbiosis. Elife. 2021. 10:e58371.
  • Tam LTT, Jähne J, Luong PT, Thao LTP, Chung LTK, Schneider A, Blumenscheit C, Lasch P, Schweder T, Borriss R. Draft Genome Sequences of 59 Endospore-Forming Gram-Positive Bacteria Associated with Crop Plants Grown in Vietnam. Microbiol Resour Announc. 2020. 9(47):e01154-20.
  • Sichert A, Corzett CH, Schechter MS, Unfried F, Markert S, Becher D, Fernandez-Guerra A, Liebeke M, Schweder T, Polz MF, Hehemann JH. Verrucomicrobia use hundreds of enzymes to digest the algal polysaccharide fucoidan. Nat Microbiol. 2020. 5(8):1026-1039.
  • Zühlke MK, Schlüter R, Mikolasch A, Henning AK, Giersberg M, Lalk M, Kunze G, Schweder T, Urich T, Schauer F. Biotransformation of bisphenol A analogues by the biphenyl-degrading bacterium Cupriavidus basilensis - a structure-biotransformation relationship. Appl Microbiol Biotechnol. 2020. 104(8):3569-3583.
  • Ponnudurai R, Heiden SE, Sayavedra L, Hinzke T, Kleiner M, Hentschker C, Felbeck H, Sievert SM, Schlüter R, Becher D, Schweder T, Markert S. Comparative proteomics of related symbiotic mussel species reveals high variability of host-symbiont interactions. ISME J. 2020. 14(2):649-656.

 

2015 - 2019

 

  • Hinzke T, Kleiner M, Breusing C, Felbeck H, Häsler R, Sievert SM, Schlüter R, Rosenstiel P, Reusch TBH, Schweder T, Markert S. Host-Microbe Interactions in the Chemosynthetic Riftia pachyptila Symbiosis. mBio. 2019. 10(6):e02243-19.
  • Fischer T, Schorb M, Reintjes G, Kolovou A, Santarella-Mellwig R, Markert S, Rhiel E, Littmann S, Becher D, Schweder T, Harder J. Biopearling of Interconnected Outer Membrane Vesicle Chains by a Marine Flavobacterium. Appl Environ Microbiol. 2019. 85(19):e00829-19.
  • Krüger K, Chafee M, Ben Francis T, Glavina Del Rio T, Becher D, Schweder T, Amann RI, Teeling H. In marine Bacteroidetes the bulk of glycan degradation during algae blooms is mediated by few clades using a restricted set of genes. ISME J. 2019. 13(11):2800-2816.
  • Reisky L, Préchoux A, Zühlke MK, Bäumgen M, Robb CS, Gerlach N, Roret T, Stanetty C, Larocque R, Michel G, Tao S, Markert S, Unfried F, Mihovilovic MD, Trautwein-Schult A, Becher D, Schweder T, Bornscheuer UT, Hehemann JH. A marine bacterial enzymatic cascade degrades the algal polysaccharide ulvan. Nature Chem Biol. 2019. 15(8):803-812.
  • Moeller FU, Webster NS, Herbold CW, Behnam F, Domman D, Albertsen M, Mooshammer M, Markert S, Turaev D, Becher D, Rattei T, Schweder T, Richter A, Watzka M, Nielsen PH, Wagner M. Characterization of a thaumarchaeal symbiont that drives incomplete nitrification in the tropical sponge Ianthella basta. Environ Microbiol. 2019. 21(10):3831-3854.
  • Meier DV, Pjevac P, Bach W, Markert S, Schweder T, Jamieson J, Petersen S, Amann R, Meyerdierks A. Microbial metal-sulfide oxidation in inactive hydrothermal vent chimneys suggested by metagenomic and metaproteomic analyses. Environ Microbiol. 2019. 21(2):682-701.
  • Trung NT, Hung NM, Thuan NH, Canh NX, Schweder T, Jürgen B. An auto-inducible phosphate-controlled expression system of Bacillus licheniformis. BMC Biotechnol. 2019. 19(1):3.
  • Kappelmann L, Krüger K, Hehemann JH, Harder J, Markert S, Unfried F, Becher D, Shapiro N, Schweder T, Amann RI, Teeling H. Polysaccharide utilization loci of North Sea Flavobacteriia as basis for using SusC/D-protein expression for predicting major phytoplankton glycans. ISME J. 2019. 13(1):76-91.
  • Koch H, Dürwald A, Schweder T, Noriega-Ortega B, Vidal-Melgosa S, Hehemann JH, Dittmar T, Freese HM, Becher D, Simon M, Wietz M. Biphasic cellular adaptations and ecological implications of Alteromonas macleodii degrading a mixture of algal polysaccharides. ISME J. 2019. 13(1):92-103.
  • Götz F, Pjevac P, Markert S, McNichol J, Becher D, Schweder T, Mussmann M, Sievert SM. Transcriptomic and proteomic insight into the mechanism of cyclooctasulfur- versus thiosulfate-oxidation by the chemolithoautotroph Sulfurimonas denitrificans. Environ Microbiol. 2018. 21(1):244-258.
  • Chen J, Robb CS, Unfried F, Kappelmann L, Markert S, Song T, Harder J, Avcı B, Becher D, Xie P, Amann RI, Hehemann JH, Schweder T, Teeling H. Alpha- and beta-mannan utilization by marine Bacteroidetes. Environ Microbiol. 2018. 20(11):4127-4140.
  • Unfried F, Becker S, Robb CS, Hehemann JH, Markert S, Heiden SE, Hinzke T, Becher D, Reintjes G, Krüger K, Avcı B, Kappelmann L, Hahnke RL, Fischer T, Harder J, Teeling H, Fuchs B, Barbeyron T, Amann RI, Schweder T. Adaptive mechanisms that provide competitive advantages to marine bacteroidetes during microalgal blooms. ISME J. 2018. 12(12):2894-2906.
  • Pjevac P, Meier DV, Markert S, Hentschker C, Schweder T, Becher D, Gruber-Vodicka HR, Richter M, Bach W, Amann R, Meyerdierks A. Metaproteogenomic Profiling of Microbial Communities Colonizing Actively Venting Hydrothermal Chimneys. Front Microbiol. 2018. 9:680.
  • Reisky L, Büchsenschütz HC, Engel J, Song T, Schweder T, Hehemann JH, Bornscheuer UT. Oxidative demethylation of algal carbohydrates by cytochrome P450 monooxygenases. Nat Chem Biol. 2018. 14(4):342-344.
  • Ponnudurai R, Sayavedra L, Kleiner M, Heiden SE, Thürmer A, Felbeck H, Schlüter R, Sievert SM, Daniel R, Schweder T, Markert S. Genome sequence of the sulfur-oxidizing Bathymodiolus thermophilus gill endosymbiont. Stand Genomic Sci. 2017. 12:50.
  • Badur AH, Plutz MJ, Yalamanchili G, Jagtap SS, Schweder T, Unfried F, Markert S, Polz MF, Hehemann JH, Rao CV. Exploiting Fine-scale Genetic and Physiological Variation of Closely Related Microbes to Reveal Unknown Enzyme Functions. J Biol Chem. 2017. 292(31):13056-13067.
  • Handtke S, Albrecht D, Zühlke D, Otto A, Becher D, Schweder T, Riedel K, Hecker M, Voigt B. Bacillus pumilus KatX2 confers enhanced hydrogen peroxide resistance to a Bacillus subtilis PkatA::katX2 mutant strain. Microb Cell Fact. 2017. 16(1):72.
  • Giovannelli D, Sievert SM, Hügler M, Markert S, Becher D, Schweder T, Vetriani C. Insight into the evolution of microbial metabolism from the deep-branching bacterium, Thermovibrio ammonificans. eLife. 2017. 6:e18990.
  • Hehemann JH, Truong LV, Unfried F, Welsch N, Kabisch J, Heiden SE, Junker S, Becher D, Thürmer A, Daniel R, Amann R, Schweder T. Aquatic adaptation of a laterally acquired pectin degradation pathway in marine Gammaproteobacteria. Environ Microbiol. 2017. 19(6):2320-2333.
  • Ponnudurai R, Kleiner M, Sayavedra L, Petersen JM, Moche M, Otto A, Becher D, Takeuchi T, Satoh N, Dubilier N, Schweder T, Markert S. Metabolic and physiological interdependencies in the Bathymodiolus azoricus symbiosis. ISME J. 2017. 11(2):463-477.
  • Stentzel S, Teufelberger A, Nordengrün M, Kolata J, Schmidt F, van Crombruggen K, Michalik S, Kumpfmüller J, Tischer S, Schweder T, Hecker M, Engelmann S, Völker U, Krysko O, Bachert C, Bröker BM. Staphylococcal serine protease-like proteins are pacemakers of allergic airway reactions to Staphylococcus aureus. J Allergy Clin Immunol. 2017. 139(2):492-500.e8.
  • König S, Gros O, Heiden SE, Hinzke T, Thürmer A, Poehlein A, Meyer S, Vatin M, Mbéguié-A-Mbéguié D, Tocny J, Ponnudurai R, Daniel R, Becher D, Schweder T, Markert S. Nitrogen fixation in a chemoautotrophic lucinid symbiosis. Nat Microbiol. 2016. 2:16193.
  • Marmulla R, Cala EP, Markert S, Schweder T, Harder J. The anaerobic linalool metabolism in Thauera linaloolentis 47Lol. BMC Microbiol. 2016. 16:76.
  • Marmulla R, Šafarić B, Markert S, Schweder T, Harder J. Linalool isomerase, a membrane-anchored enzyme in the anaerobic monoterpene degradation in Thauera linaloolentis 47Lol. BMC Biochem. 2016. 17:6.
  • Preisitsch M, Heiden SE, Beerbaum M, Niedermeyer THJ, Schneefeld M, Herrmann J, Kumpfmüller J, Thürmer A, Neidhardt I, Wiesner C, Daniel R, Müller R, Bange F-C, Schmieder P, Schweder T, Mundt S. Effects of Halide Ions on the Carbamidocyclophane Biosynthesis in Nostoc sp. CAVN2. Mar Drugs. 2016. 14(1):21.
  • Sayavedra L, Kleiner M, Ponnudurai R, Wetzel S, Pelletier E, Barbe V, Satoh N, Shoguchi E, Fink D, Breusing C, Reusch TB, Rosenstiel P, Schilhabel MB, Becher D, Schweder T, Markert S, Dubilier N, Petersen JM. Abundant toxin-related genes in the genomes of beneficial symbionts from deep-sea hydrothermal vent mussels. eLife. 2015. 4:e07966.
  • Voigt B, Albrecht D, Sievers S, Becher D, Bongaerts J, Evers S, Schweder T, Maurer KH, Hecker M. High-resolution proteome maps of Bacillus licheniformis cells growing in minimal medium. Proteomics. 2015. 15(15):2629-33.

 

2010 - 2014

 

  • Voigt B, Schroeter R, Schweder T, Jürgen B, Albrecht D, van Dijl JM, Maurer KH, Hecker M. A proteomic view of cell physiology of the industrial workhorse Bacillus licheniformis. J Biotechnol. 2014. 191:139-49.
  • Xing P, Hahnke RL, Unfried F, Markert S, Huang S, Barbeyron T, Harder J, Becher D, Schweder T, Glöckner FO, Amann RI, Teeling H. Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom. ISME J. 2014. 9(6):1410-22.
  • Kabisch A, Otto A, König S, Becher D, Albrecht D, Schüler M, Teeling H, Amann RI, Schweder T. Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes 'Gramella forsetii' KT0803. ISME J. 2014. 8(7):1492-502.
  • Petasch J, Disch EM, Markert S, Becher D, Schweder T, Hüttel B, Reinhardt R, Harder J. The oxygen-independent metabolism of cyclic monoterpenes in Castellaniella defragrans 65Phen. BMC Microbiol. 2014. 14:164.
  • Handtke S, Schroeter R, Jürgen B, Methling K, Schlüter R, Albrecht D, van Hijum SA, Bongaerts J, Maurer KH, Lalk M, Schweder T, Hecker M, Voigt B. Bacillus pumilus reveals a remarkably high resistance to hydrogen peroxide provoked oxidative stress. PLoS One. 2014. 9(1):e85625.
  • Schroeter R, Hoffmann T, Voigt B, Meyer H, Bleisteiner M, Muntel J, Jürgen B, Albrecht D, Becher D, Lalk M, Evers S, Bongaerts J, Maurer KH, Putzer H, Hecker M, Schweder T, Bremer E. Stress Responses of the Industrial Workhorse Bacillus licheniformis to Osmotic Challenges. PLoS One. 2013. 8(11):e80956.
  • Kabisch J, Pratzka I, Meyer H, Albrecht D, Lalk M, Ehrenreich A, Schweder T. Metabolic engineering of Bacillus subtilis for growth on overflow metabolites. Microb Cell Fact. 2013. 12:72.
  • Voigt B, Schroeter R, Jürgen B, Albrecht D, Evers S, Bongaerts J, Maurer KH, Schweder T, Hecker M. The response of Bacillus licheniformis to heat and ethanol stress and the role of the SigB regulon. Proteomics. 2013. 13(14):2140-61.
  • Golec P, Karczewska-Golec J, Voigt B, Albrecht D, Schweder T, Hecker M, Wegrzyn G, Łos M. Proteomic profiles and kinetics of development of bacteriophage T4 and its rI and rIII mutants in slowly growing Escherichia coli. J Gen Virol. 2013. 94(Pt 4):896-905.
  • Kabisch J, Thürmer A, Hübel T, Popper L, Daniel R, Schweder T. Characterization and optimization of Bacillus subtilis ATCC 6051 as an expression host. J Biotechnol. 2013. 163(2):97-104.
  • Heinz E, Williams TA, Nakjang S, Noël CJ, Swan DC, Goldberg AV, Harris SR, Weinmaier T, Markert S, Becher D, Bernhardt J, Dagan T, Hacker C, Lucocq JM, Schweder T, Rattei T, Hall N, Hirt RP, Embley TM. The Genome of the Obligate Intracellular Parasite Trachipleistophora hominis: New Insights into Microsporidian Genome Dynamics and Reductive Evolution. PLoS Pathog. 2012. 8(10):e1002979.
  • Teeling H, Fuchs BM, Becher D, Klockow C, Gardebrecht A, Bennke CM, Kassabgy M, Huang S, Mann AJ, Waldmann J, Weber M, Klindworth A, Otto A, Lange J, Bernhardt J, Reinsch C, Hecker M, Peplies J, Bockelmann FD, Callies U, Gerdts G, Wichels A, Wiltshire KH, Glöckner FO, Schweder T, Amann R. Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom. Science. 2012. 336(6081):608-11.
  • Kleiner M, Wentrup C, Lott C, Teeling H, Wetzel S, Young J, Chang YJ, Shah M, VerBerkmoes NC, Zarzycki J, Fuchs G, Markert S, Hempel K, Voigt B, Becher D, Liebeke M, Lalk M, Albrecht D, Hecker M, Schweder T, Dubilier N. Metaproteomics of a gutless marine worm and its symbiotic microbial community reveal unusual pathways for carbon and energy use. Proc Natl Acad Sci U S A. 2012. 109(19):E1173-82.
  • Quiel A, Jürgen B, Greinacher A, Lassen S, Wörl R, Witt S, Schweder T. Sensitive detection of idiotypic platelet-reactive alloantibodies by an electrical protein chip. Biosens Bioelectron. 2012. 36(1):207-11.
  • Voigt B, Hieu CX, Hempel K, Becher D, Schlüter R, Teeling H, Glöckner FO, Amann R, Hecker M, Schweder T. Cell surface proteome of the marine planctomycete Rhodopirellula baltica. Proteomics. 2012. 12(11):1781-91.
  • Gardebrecht A, Markert S, Sievert SM, Felbeck H, Thürmer A, Albrecht D, Wollherr A, Kabisch J, Le Bris N, Lehmann R, Daniel R, Liesegang H, Hecker M, Schweder T. Physiological homogeneity among the endosymbionts of Riftia pachyptila and Tevnia jerichonana revealed by proteogenomics. ISME J. 2012. 6(4):766-76.
  • Wilmes B, Kock H, Glagla S, Albrecht D, Voigt B, Markert S, Gardebrecht A, Bode R, Danchin A, Feller G, Hecker M, Schweder T. Cytoplasmic and Periplasmic Proteomic Signatures of Exponentially Growing Cells of the Psychrophilic Bacterium Pseudoalteromonas haloplanktis TAC125. Appl Environ Microbiol. 2011. 77(4):1276-83.
  • Markert S, Gardebrecht A, Felbeck H, Sievert SM, Klose J, Becher D, Albrecht D, Thürmer A, Daniel R, Kleiner M, Hecker M, Schweder T. Status quo in physiological proteomics of the uncultured Riftia pachyptila endosymbiont. Proteomics. 2011. 11(15):3106-17.
  • Schroeter R, Voigt B, Jürgen B, Methling K, Pöther DC, Schäfer H, Albrecht D, Mostertz J, Mäder U, Evers S, Maurer KH, Lalk M, Mascher T, Hecker M, Schweder T. The peroxide stress response of Bacillus licheniformis. Proteomics. 2011. 11(14):2851-66.
  • Junne S, Klingner A, Kabisch J, Schweder T, Neubauer P. A two-compartment bioreactor system made of commercial parts for bioprocess scale-down studies: Impact of oscillations on Bacillus subtilis fed-batch cultivations. Biotechnol J. 2011. 6(8):1009-17.
  • Uhlig C, Kabisch J, Palm GJ, Valentin K, Schweder T, Krell A. Heterologous expression, refolding and functional characterization of two antifreeze proteins from Fragilariopsis cylindrus (Bacillariophyceae). Cryobiology. 2011. 63(3):220-8.
  • Lohsse A, Ullrich S, Katzmann E, Borg S, Wanner G, Richter M, Voigt B, Schweder T, Schüler D. Functional Analysis of the Magnetosome Island in Magnetospirillum gryphiswaldense: The mamAB Operon Is Sufficient for Magnetite Biomineralization. PLoS One. 2011. 6(10):e25561.
  • Quiel A, Jürgen B, Piechotta G, Le Foll AP, Ziebandt AK, Kohler C, Köster D, Engelmann S, Erck C, Hintsche R, Wehland J, Hecker M, Schweder T. Electrical protein array chips for the detection of staphylococcal virulence factors. Appl Microbiol Biotechnol. 2010. 85(5):1619-27.
  • Jürgen B, Breitenstein A, Urlacher V, Büttner K, Lin H, Hecker M, Schweder T, Neubauer P. Quality control of inclusion bodies in Escherichia coli. Microb Cell Fact. 2010. 9:41.
  • Thanh TN, Jürgen B, Bauch M, Liebeke M, Lalk M, Ehrenreich A, Evers S, Maurer KH, Antelmann H, Ernst F, Homuth G, Hecker M, Schweder T. Regulation of acetoin and 2,3-butanediol utilization in Bacillus licheniformis. Appl Microbiol Biotechnol. 2010. 87(6):2227-35.
  • Uebe R, Voigt B, Schweder T, Albrecht D, Katzmann E, Lang C, Böttger L, Matzanke B, Schüler D. Deletion of a fur-Like Gene Affects Iron Homeostasis and Magnetosome Formation in Magnetospirillum gryphiswaldense. J Bacteriol. 2010. 192(16):4192-204.
  • Wilmes B, Hartung A, Lalk M, Liebeke M, Schweder T, Neubauer P. Fed-batch process for the psychrotolerant marine bacterium Pseudoalteromonas haloplanktis. Microb Cell Fact. 2010. 9:72.

 

2005 - 2009

 

  • Voigt B, Antelmann H, Albrecht D, Ehrenreich A, Maurer KH, Evers S, Gottschalk G, van Dijl JM, Schweder T, Hecker M. Cell Physiology and Protein Secretion of Bacillus licheniformis Compared to Bacillus subtilis. J Mol Microbiol Biotechnol. 2009. 16(1-2):53-68.
  • Mostertz J, Hochgräfe F, Jürgen B, Schweder T, Hecker M. The role of thioredoxin TrxA in Bacillus subtilis: A proteomics and transcriptomics approach. Proteomics. 2008. 8(13):2676-90.
  • Hieu CX, Voigt B, Albrecht D, Becher D, Lombardot T, Glöckner FO, Amann R, Hecker M, Schweder T. Detailed proteome analysis of growing cells of the planctomycete Rhodopirellula baltica SH1T. Proteomics. 2008. 8(8):1608-23.
  • Pioch D, Jürgen B, Evers S, Maurer KH, Hecker M, Schweder T. Improved sandwich-hybridization assay for an electrical DNA-chip-based monitoring of bioprocess-relevant marker genes. Appl Microbiol Biotechnol. 2008. 78(4):719-28.
  • Markert S, Arndt C, Felbeck H, Becher D, Sievert SM, Hügler M, Albrecht D, Robidart J, Bench S, Feldman RA, Hecker M, Schweder T. Physiological Proteomics of the Uncultured Endosymbiont of Riftia pachyptila. Science. 2007. 315(5809):247-50.
  • Voigt B, Hoi LT, Jürgen B, Albrecht D, Ehrenreich A, Veith B, Evers S, Maurer KH, Hecker M, Schweder T. The glucose and nitrogen starvation response of Bacillus licheniformis. Proteomics. 2007. 7(3):413-23.
  • Borriss M, Lombardot T, Glöckner FO, Becher D, Albrecht D, Schweder T. Genome and proteome characterization of the psychrophilic Flavobacterium bacteriophage 11b. Extremophiles. 2007. 11(1):95-104.
  • Hoi LT, Voigt B, Jürgen B, Ehrenreich A, Gottschalk G, Evers S, Feesche J, Maurer KH, Hecker M, Schweder T. The phosphate-starvation response of Bacillus licheniformis. Proteomics. 2006. 6(12):3582-601.
  • Papa R, Glagla S, Danchin A, Schweder T, Marino G, Duilio A. Proteomic identification of a two-component regulatory system in Pseudoalteromonas haloplanktis TAC125. Extremophiles. 2006. 10(6):483-91.
  • Elsholz B, Wörl R, Blohm L, Albers J, Feucht H, Grunwald T, Jürgen B, Schweder T, Hintsche R. Automated Detection and Quantitation of Bacterial RNA by Using Electrical Microarrays. Anal Chem. 2006. 78(14):4794-802.
  • Voigt B, Schweder T, Sibbald MJ, Albrecht D, Ehrenreich A, Bernhardt J, Feesche J, Maurer KH, Gottschalk G, van Dijl JM, Hecker M. The extracellular proteome of Bacillus licheniformis grown in different media and under different nutrient starvation conditions. Proteomics. 2006. 6(1):268-81.
  • Jürgen B, Tobisch S, Wümpelmann M, Gördes D, Koch A, Thurow K, Albrecht D, Hecker M, Schweder T. Global expression profiling of Bacillus subtilis cells during industrial-close fed-batch fermentations with different nitrogen sources. Biotechnol Bioeng. 2005. 92(3):277-98.
  • Jürgen B, Barken KB, Tobisch S, Pioch D, Wümpelmann M, Hecker M, Schweder T. Application of an electric DNA-chip for the expression analysis of bioprocess-relevant marker genes of Bacillus subtilis. Biotechnol Bioeng. 2005. 92(3):299-307.

 

2000 - 2004

 

  • Gabig-Ciminska M, Holmgren A, Andresen H, Bundvig Barken K, Wümpelmann M, Albers J, Hintsche R, Breitenstein A, Neubauer P, Los M, Czyz A, Wegrzyn G, Silfversparre G, Jürgen B, Schweder T, Enfors SO. Electric chips for rapid detection and quantification of nucleic acids. Biosens Bioelectron. 2004. 19(6):537-46.
  • Voigt B, Schweder T, Becher D, Ehrenreich A, Gottschalk G, Feesche J, Maurer KH, Hecker M. A proteomic view of cell physiology of Bacillus licheniformis. Proteomics. 2004. 4(5):1465-90.
  • Borriss M, Helmke E, Hanschke R, Schweder T. Isolation and characterization of marine psychrophilic phage-host systems from Arctic sea ice. Extremophiles. 2003. 7(5):377-84.
  • Schweder T, Lin HY, Jürgen B, Breitenstein A, Riemschneider S, Khalameyzer V, Gupta A, Büttner K, Neubauer P. Role of the general stress response during strong overexpression of a heterologous gene in Escherichia coli. Appl Microbiol Biotechnol. 2002. 58(3):330-7.
  • Enfors SO, Jahic M, Rozkov A, Xu B, Hecker M, Jürgen B, Krüger E, Schweder T, Hamer G, O'Beirne D, Noisommit-Rizzi N, Reuss M, Boone L, Hewitt C, McFarlane C, Nienow A, Kovacs T, Trägårdh C, Fuchs L, Revstedt J, Friberg PC, Hjertager B, Blomsten G, Skogman H, Hjort S, Hoeks F, Lin HY, Neubauer P, van der Lans R, Luyben K, Vrabel P, Manelius Å. Physiological responses to mixing in large scale bioreactors. J Biotechnol. 2001. 85(2):175-85.
  • Truong LV, Tuyen H, Helmke E, Binh LT, Schweder T. Cloning of two pectate lyase genes from the marine Antarctic bacterium Pseudoalteromonas haloplanktis strain ANT/505 and characterization of the enzymes. Extremophiles. 2001. 5(1):35-44.
  • Bendt A, Hüller H, Kammel U, Helmke E, Schweder T. Cloning, expression, and characterization of a chitinase gene from the Antarctic psychrotolerant bacterium Vibrio sp. strain Fi:7. Extremophiles. 2001. 5(2):119-26.
  • Jürgen B, Lin HY, Riemschneider S, Scharf C, Neubauer P, Schmid R, Hecker M, Schweder T. Monitoring of genes that respond to overproduction of an insoluble recombinant protein in Escherichia coli glucose-limited fed-batch fermentations. Biotechnol Bioeng. 2000. 70(2):217-24.

 

1999

 

  • Schweder T, Kolyschkow A, Völker U, Hecker M. Analysis of the expression and function of the σB-dependent general stress regulon of Bacillus subtilis during slow growth. Arch Microbiol. 1999. 171(6):439-43.
  • Schweder T, Krüger E, Xu B, Jürgen B, Blomsten G, Enfors SO, Hecker M. Monitoring of genes that respond to process-related stress in large-scale bioprocesses. Biotechnol Bioeng. 1999. 65(2):151-9.
Reviews
Book chapters
  • Jürgen B, Schweder T. 2001. Monitoring of genes that respond to overproduction of insoluble recombinant proteins in Escherichia coli and Bacillus subtilis. In: Recombinant protein production with prokaryotic and eukaryotic cells. A comparative view on host cell physiology, Merten, O.W. et al. eds. Kluwer academic publishers pp. 357-368.
  • Lindequist U, Schweder T. 2001. Marine Biotechnology. In: Biotechnology, H.J. Rehm and G. Reed eds., VCH. Vol. 11.
  • Schweder T. 1996. The two strategies of biological containment of gentically engineered bacteria. In: Transgenic Organisms. Risk Assessment of Deliberate Release. Birkhäuser Verlag. Zürich. pp. 113-125.
Patents
  • Evers S, Maurer KH, Hoi LT, Schweder T, Hecker M, Jürgen B, Voigt B. 2005. Nukleinsäure-bindende Chips zur Detektion von Stickstoffmangelzuständen im Rahmen der Bioprozesskontrolle. DE 022005 070 856.4
  • Evers S, Maurer KH, Hoi LT, Schweder T, Hecker M, Jürgen B, Voigt B. 2004. Nukleinsäure-bindende Chips zur Detektion von Phosphatmangelzuständen im Rahmen der Bioprozesskontrolle. DE 102004 061 664.7
  • Schweder T, Hecker M, Jürgen B, Voigt B, Feesche J, Brewes R, Maurer KH. 2003. DNA chips used for bioprocess control. PCT/EP2003/009979
  • Schweder T, Homuth G. 2003. Kälte-induzierbares Expressionssystem. DE10334811.5
  • Schweder T. 2001. Überproduktion kälteangepaßter, thermolabiler Proteine in transgenen Pflanzen. DE101 01 266.7
  • Schweder T, Antelmann H, Hecker M. 2000. Wirts-Vektor-Systeme zur phosphatregulierten Überproduktion von Polypeptiden in Bacillus. PCT EP 01/02877